Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932831.1_cds_XP_016479266.1_70821
CDS Infomation

[gene=LOC107800589] [db_xref=GeneID:107800589] [protein=protein NSP-INTERACTING KINASE 2-like isoform X2] [protein_id=XP_016479266.1] [location=complement(join(38141..38470,38599..38978,39716..40057,40131..40280,40393..40490,40828..40887,40982..41053,41197..41286,41373..41444,41532..41661,41778..41865))] [gbkey=CDS]
Sequence

ATGAATGCTGTTTTGGGATATTTGACCTTATTCTGCTTCTTGGCTTATGCTAATGCTATG
CTTACTCCAGCTGGTGTCAATTATGAAGTGCAAGCTTTAATGGAGATAAAGAAGGTTTTA
AATGATCCTCATAATGTTTTGAACTGGGATGAAAATGCTGTTGATCCCTGTAGCTGGAAT
ATGGTGACTTGTTCAACTGATAAATTTGTCATTGGCCTGGCAAGTCCTAGCCAAAGTTTG
TCTGGCAAAATATCACCATATATCCACAATTTGACTCACCTTGAGCTTGTACTTCTGCAG
AGCAATAATATATCAGGATCAATTCCTTTGGAGCTTGGAATGCTTCCAAAACTTAAGACA
ATTGATCTTTCTGATAACAAGAGATTAAACAACAACAGTCTAACTGGAGCAGTTCCTGTG
GACTTGGCCAATATGACTCAGCTGTCACTTATGGACTTGTCTTTCAACAATCTCAGTGGT
CCTGTGCCAAGGCTTCTTGCTAAAACATTCAACATTTTAGGGAATCCCATGATATGTGCA
ACTGGTAAAGAGGCAGAATGCAATGGAACAACACCAATGCCCCTCTCCTTCTCTTTAAAC
AATCCACAAGATACTCAGCCTTCTGGAAAATCAAAGACTCACAAGTTTGCCTTCGCCTTT
GGGACAAGTCTAGGGTGCATCTGCCTACTAATAGCCGGGTTTGGCTTCTTTCTGTGGTGG
AGACAAAAGCACAACAAGCAGATTTTCTTTGACAGTAATGAACAACATCATGAAGAAGTG
TGCTTAGGCAACTTAAGGAGGTTCCAATTTAAGGAACTTCAAGGTGCCACAAACAACTTC
AGCAGCAAGAACATACTAGGGAAAGGTGGTTTTGGACATGTTTATAAAGGTCGTCTCCAT
GATGGGAATATTGTAGCTGTGAAAAGGCTCAAAGATGGAAATGCAGCTGGAGGCGATAAG
CAATTTCAGACTGAAGTCGCGTTGATCAGCCTAGCAGTTCATCGCAATCTTCTCCGGTTG
TATGGATTTTGCATGACACCAACTGAAAGGCTGCTGGTCTATCCTTACATGTCTAATGGA
AGTGTAGCTTCACGTCTCAAGGCCAAACCAACCTTGGATTGGAGTACAAGAAAAAGCATA
GCTTTGGGAGCTGCAAGGGGTTTATTATATCTGCATGAGCAGTGTGATCCTAAGATCATT
CACAGGGACGTGAAAGCTGCAAATATATTACTTGACGATTACTGTGAGGCTGTTGTGGGT
GATTTTGGATTGGCAAAGCTTTTGGATCATCACGATTCACATGTCACAACCGCGGTTAGG
GGTACTGTAGGACATATAGCTCCCGAGTACCTTTCTACCGGACAGTCCTCTGATAAAACG
GACGTTTTTGGTTTTGGTATTCTCTTGCTAGAATTGATCACTGGTCAAAGAGCTTTAGAA
TTTGGTAAAGCAGCAAACCAGAAAGGCGCCATGCTTGACTGGGTAAAAAAGATACACCAG
GAGAAAAAGCTAGACATGTTGGTGGACAAGGACATGAAAAACAACTATGATAGGATTGAG
CTAGAGGAAATGGTACAAGTAGCATTATTGTGCACTCAGTATCACCCAAGTCAGAGACCA
AGAATGTCAGAAGTTGTTAGAATGCTAGAAGGGGATGGACTAGCAGAGAAGTGGGAAGCT
TCTCAAAGAGCAGAACCCAACACAAGATGCAGCAGAGCCAATGAGTTTTCCTCTTCAGAA
AGATACTCTGATCTCACTGAGAATGATTCTTCATTGCTTGTACAAGCAATGGAACTATCT
GGTCCAAGATGA

Peptide Sequence

PEP ID

XP_016479266.1
PEP Infomation

PREDICTED: protein NSP-INTERACTING KINASE 2-like isoform X2 [Nicotiana tabacum]
Sequence

MNAVLGYLTLFCFLAYANAMLTPAGVNYEVQALMEIKKVLNDPHNVLNWDENAVDPCSWN
MVTCSTDKFVIGLASPSQSLSGKISPYIHNLTHLELVLLQSNNISGSIPLELGMLPKLKT
IDLSDNKRLNNNSLTGAVPVDLANMTQLSLMDLSFNNLSGPVPRLLAKTFNILGNPMICA
TGKEAECNGTTPMPLSFSLNNPQDTQPSGKSKTHKFAFAFGTSLGCICLLIAGFGFFLWW
RQKHNKQIFFDSNEQHHEEVCLGNLRRFQFKELQGATNNFSSKNILGKGGFGHVYKGRLH
DGNIVAVKRLKDGNAAGGDKQFQTEVALISLAVHRNLLRLYGFCMTPTERLLVYPYMSNG
SVASRLKAKPTLDWSTRKSIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVG
DFGLAKLLDHHDSHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELITGQRALE
FGKAANQKGAMLDWVKKIHQEKKLDMLVDKDMKNNYDRIELEEMVQVALLCTQYHPSQRP
RMSEVVRMLEGDGLAEKWEASQRAEPNTRCSRANEFSSSERYSDLTENDSSLLVQAMELS
GPR

Transcript Sequence

Gene sequence data has not been registered.